Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829527.1_cds_XP_016503775.1_17285
CDS Infomation

[gene=LOC107821829] [db_xref=GeneID:107821829] [protein=IQ domain-containing protein IQM3-like] [protein_id=XP_016503775.1] [location=join(14202..14449,15310..15424,15547..15612,15708..15796,16519..16606,16904..17050,17139..17231,17821..17922,18675..19091)] [gbkey=CDS]
Sequence

ATGGAAGTGAAAACTCACGCTCTTTCTGCTTTTGATTTCAACTCTCAGCCTCCGTACAAC
TCCTATATAGAACAATCGGAGCTCCGTGCTACCGATATTTTGAGCTCCGACATGTCCGCT
TCTTCCAATGACGGGGAATATTGCGAGCGGTCTGTTTCAAATGCTGCCATGAAAGTGCAG
AAGGTTTACAGGAGTTACCGCACGCGGCGCATGTTAGCGGACTCTGCCGTCGTTGCTGAA
GTACTCTGGTGGCAAGCCATAGATTATGCTCGATTGAATCACAGTACAATTTCTTTCTTC
AATTTCTTGAAACCAGAAACGGCATCTTCCCGGTGGAATCGCATAAGCTTAAATGCTTCC
AAGGTTGGTAAGGGTCTGTCAAAAGATGCCAAAGCTCAGAAATTGGCATTTCAACACTGG
ATTGAAGCAATTGACCCACGCCATCGTTATGGGCATAACTTGCATATTTATTATGAAGAA
TGGTGTAAAACTGACTCTGGTCAGCCCTTCTTCTTTTGGTTGGATCTTGGAGATGGCAAA
AAGGTTGATCTCAAAGAATGTCCGAGATCTAAGCTTCAGAAGCAAAGTATCAAGTACCTT
GGACCTCAAGAAAGAGAACATTATGAATATATCGTTGTTGAAGGGAGAATTGTGCATGCA
AAAACTGGAAATCTTCTTGATACTACTAAAGGGTTGCCAGGGGCAAAGTGGATTTTTGTG
ATGGCCACGTCAAAAAGACTCTATGCTGGTGAAAAAAAGAAAGGAATGTTTCATCATTCC
AGCTTTCTTGCTGGTGGGGCTACTTCAGCGGCTGGAAGACTAGTGGTAGAGGATGGAAGA
GTTATGTCTATTTCAGCATATAGTGGACATTATCGGCCAACGGAAGATAGACTTGATAGC
TTTTTATCATTTCTCAATGAAAATGGGGTCAACCTGGATGAAGTCGAGATAGGGAAGGCA
AATGAAGCCTATGAAAGCTATGATGATGGGATGTCTATTGAAAGTGGCTCAGCATATGAA
TGTTCAGCTCTATCAGATTCTGCTTCTCAAGTTGATTTTCCAAAGGAAGAGGAAGAAAGC
CTTCCCTTGGAATCAGCTGGAAATCTGGTAGCTCAAACGAGTAAGTATAACCGATCGCTC
TCAGGTGGTCTTCAGATCCCAATAGCAGATATGCCAAAGACTGCAATACTGCGAAGGATG
CATTCCGAGAAGTCCACGAAGTCGTATCACCTGGGGCATCAACTTTCCGTGTCGTGGTCA
ACAGGTGCTGGACCAAGAATTGGCTGTGTTGCTGACTTCCCTGCTGAGCTAAGATGGCAG
GCCTTGGAACTGACTAACCTCTCACCTAGACCTTGTTCTGTATGA

Peptide Sequence

PEP ID

XP_016503775.1
PEP Infomation

PREDICTED: IQ domain-containing protein IQM3-like [Nicotiana tabacum]
Sequence

MEVKTHALSAFDFNSQPPYNSYIEQSELRATDILSSDMSASSNDGEYCERSVSNAAMKVQ
KVYRSYRTRRMLADSAVVAEVLWWQAIDYARLNHSTISFFNFLKPETASSRWNRISLNAS
KVGKGLSKDAKAQKLAFQHWIEAIDPRHRYGHNLHIYYEEWCKTDSGQPFFFWLDLGDGK
KVDLKECPRSKLQKQSIKYLGPQEREHYEYIVVEGRIVHAKTGNLLDTTKGLPGAKWIFV
MATSKRLYAGEKKKGMFHHSSFLAGGATSAAGRLVVEDGRVMSISAYSGHYRPTEDRLDS
FLSFLNENGVNLDEVEIGKANEAYESYDDGMSIESGSAYECSALSDSASQVDFPKEEEES
LPLESAGNLVAQTSKYNRSLSGGLQIPIADMPKTAILRRMHSEKSTKSYHLGHQLSVSWS
TGAGPRIGCVADFPAELRWQALELTNLSPRPCSV

Transcript Sequence

Gene sequence data has not been registered.